Arbuscular Mycorrhizal Fungal Communities of Native Plant Species under High Petroleum Hydrocarbon Contamination Highlights Rhizophagus as a Key Tolerant Genus.
Identifieur interne : 000561 ( Main/Exploration ); précédent : 000560; suivant : 000562Arbuscular Mycorrhizal Fungal Communities of Native Plant Species under High Petroleum Hydrocarbon Contamination Highlights Rhizophagus as a Key Tolerant Genus.
Auteurs : Soon-Jae Lee [Suisse] ; Mengxuan Kong [Canada] ; Marc St-Arnaud [Canada] ; Mohamed Hijri [Canada, Maroc]Source :
- Microorganisms [ 2076-2607 ] ; 2020.
Abstract
Arbuscular mycorrhizal fungi (AMF) have been shown to play an important role in increasing plant fitness in harsh conditions. Therefore, AMF are currently considered to be effective partners in phytoremediation. However, AMF communities in high levels of petroleum pollution are still poorly studied. We investigated the community structures of AMF in roots and rhizospheric soils of two plant species, Eleocharis elliptica and Populus tremuloides, growing spontaneously in high petroleum-contaminated sedimentation basins of a former petrochemical plant (91,000 μg/Kg of C10-C50 was recorded in a basin which is 26-fold higher than the threshold of polluted soil in Quebec, Canada). We used a PCR cloning, and sequencing approach, targeting the 18S rRNA gene to identify AMF taxa. The high concentration of petroleum-contamination largely influenced the AMF diversity, which resulted in less than five AMF operational taxonomical units (OTUs) per individual plant at all sites. The OTUs detected belong mainly to the Glomerales, with some from the Diversisporales and Paraglomerales, which were previously reported in high concentrations of metal contamination. Interestingly, we found a strong phylogenetic signal in OTU associations with host plant species identity, biotopes (roots or soils), and contamination concentrations (lowest, intermediate and highest). The genus Rhizophagus was the most dominant taxon representing 74.4% of all sequences analyzed in this study and showed clear association with the highest contamination level. The clear association of Rhizophagus with high contamination levels suggests the importance of the genus for the use of AMF in bioremediation, as well as for the survey of key AMF genes related to petroleum hydrocarbon resistance. By favoring plant fitness and mediating its soil microbial interactions, Rhizophagus spp. could enhance petroleum hydrocarbon pollutant degradation by both plants and their microbiota in contaminated sites.
DOI: 10.3390/microorganisms8060872
PubMed: 32526923
PubMed Central: PMC7356029
Affiliations:
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Soon Jae" sort="Lee, Soon Jae" uniqKey="Lee S" first="Soon-Jae" last="Lee">Soon-Jae Lee</name><affiliation wicri:level="1"><nlm:affiliation>Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.</nlm:affiliation><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne</wicri:regionArea><placeName><settlement type="city">Lausanne</settlement><region nuts="3" type="region">Canton de Vaud</region></placeName></affiliation></author><author><name sortKey="Kong, Mengxuan" sort="Kong, Mengxuan" uniqKey="Kong M" first="Mengxuan" last="Kong">Mengxuan Kong</name><affiliation wicri:level="1"><nlm:affiliation>Institut de Recherche en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Institut de Recherche en Biologie Végétale, Université de 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en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Institut de Recherche en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2</wicri:regionArea><wicri:noRegion>QC H1X 2B2</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>AgroBioSciences, Mohammed VI Polytechnic University, Lot 660-Hay Moulay Rachid, 43150 Ben Guerir, Morocco.</nlm:affiliation><country xml:lang="fr">Maroc</country><wicri:regionArea>AgroBioSciences, Mohammed VI Polytechnic University, Lot 660-Hay Moulay Rachid, 43150 Ben Guerir</wicri:regionArea><wicri:noRegion>43150 Ben Guerir</wicri:noRegion></affiliation></author></analytic><series><title level="j">Microorganisms</title><idno type="ISSN">2076-2607</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Arbuscular mycorrhizal fungi (AMF) have been shown to play an important role in increasing plant fitness in harsh conditions. Therefore, AMF are currently considered to be effective partners in phytoremediation. However, AMF communities in high levels of petroleum pollution are still poorly studied. We investigated the community structures of AMF in roots and rhizospheric soils of two plant species, <i>Eleocharis elliptica</i> and <i>Populus tremuloides</i>, growing spontaneously in high petroleum-contaminated sedimentation basins of a former petrochemical plant (91,000 μg/Kg of C10-C50 was recorded in a basin which is 26-fold higher than the threshold of polluted soil in Quebec, Canada). We used a PCR cloning, and sequencing approach, targeting the 18S rRNA gene to identify AMF taxa. The high concentration of petroleum-contamination largely influenced the AMF diversity, which resulted in less than five AMF operational taxonomical units (OTUs) per individual plant at all sites. The OTUs detected belong mainly to the Glomerales, with some from the Diversisporales and Paraglomerales, which were previously reported in high concentrations of metal contamination. Interestingly, we found a strong phylogenetic signal in OTU associations with host plant species identity, biotopes (roots or soils), and contamination concentrations (lowest, intermediate and highest). The genus <i>Rhizophagus</i> was the most dominant taxon representing 74.4% of all sequences analyzed in this study and showed clear association with the highest contamination level. The clear association of <i>Rhizophagus</i> with high contamination levels suggests the importance of the genus for the use of AMF in bioremediation, as well as for the survey of key AMF genes related to petroleum hydrocarbon resistance. By favoring plant fitness and mediating its soil microbial interactions, <i>Rhizophagus</i> spp. could enhance petroleum hydrocarbon pollutant degradation by both plants and their microbiota in contaminated sites.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32526923</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>28</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Print">2076-2607</ISSN><JournalIssue CitedMedium="Print"><Volume>8</Volume><Issue>6</Issue><PubDate><Year>2020</Year><Month>Jun</Month><Day>09</Day></PubDate></JournalIssue><Title>Microorganisms</Title><ISOAbbreviation>Microorganisms</ISOAbbreviation></Journal><ArticleTitle>Arbuscular Mycorrhizal Fungal Communities of Native Plant Species under High Petroleum Hydrocarbon Contamination Highlights <i>Rhizophagus</i> as a Key Tolerant Genus.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E872</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/microorganisms8060872</ELocationID><Abstract><AbstractText>Arbuscular mycorrhizal fungi (AMF) have been shown to play an important role in increasing plant fitness in harsh conditions. Therefore, AMF are currently considered to be effective partners in phytoremediation. However, AMF communities in high levels of petroleum pollution are still poorly studied. We investigated the community structures of AMF in roots and rhizospheric soils of two plant species, <i>Eleocharis elliptica</i> and <i>Populus tremuloides</i>, growing spontaneously in high petroleum-contaminated sedimentation basins of a former petrochemical plant (91,000 μg/Kg of C10-C50 was recorded in a basin which is 26-fold higher than the threshold of polluted soil in Quebec, Canada). We used a PCR cloning, and sequencing approach, targeting the 18S rRNA gene to identify AMF taxa. The high concentration of petroleum-contamination largely influenced the AMF diversity, which resulted in less than five AMF operational taxonomical units (OTUs) per individual plant at all sites. The OTUs detected belong mainly to the Glomerales, with some from the Diversisporales and Paraglomerales, which were previously reported in high concentrations of metal contamination. Interestingly, we found a strong phylogenetic signal in OTU associations with host plant species identity, biotopes (roots or soils), and contamination concentrations (lowest, intermediate and highest). The genus <i>Rhizophagus</i> was the most dominant taxon representing 74.4% of all sequences analyzed in this study and showed clear association with the highest contamination level. The clear association of <i>Rhizophagus</i> with high contamination levels suggests the importance of the genus for the use of AMF in bioremediation, as well as for the survey of key AMF genes related to petroleum hydrocarbon resistance. By favoring plant fitness and mediating its soil microbial interactions, <i>Rhizophagus</i> spp. could enhance petroleum hydrocarbon pollutant degradation by both plants and their microbiota in contaminated sites.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Lee</LastName><ForeName>Soon-Jae</ForeName><Initials>SJ</Initials><Identifier Source="ORCID">0000-0002-7216-0236</Identifier><AffiliationInfo><Affiliation>Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kong</LastName><ForeName>Mengxuan</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>St-Arnaud</LastName><ForeName>Marc</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0002-7181-9895</Identifier><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Hijri</LastName><ForeName>Mohamed</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0001-6112-8372</Identifier><AffiliationInfo><Affiliation>Institut de Recherche en Biologie Végétale, Université de Montréal and Jardin Botanique de Montréal, 4101 Sherbrooke est, Montréal, QC H1X 2B2, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>AgroBioSciences, Mohammed VI Polytechnic University, Lot 660-Hay Moulay Rachid, 43150 Ben Guerir, Morocco.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList 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HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:32526923" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
| This area was generated with Dilib version V0.6.37. |  |